STRINGSTRING
Slin_2731 protein (Spirosoma linguale) - STRING interaction network
"Slin_2731" - Cyanophycinase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2731Cyanophycinase (295 aa)    
Predicted Functional Partners:
Slin_4152
Cyanophycin synthetase (895 aa)
 
     
  0.933
Slin_4208
Cyanophycinase-like protein (333 aa)
   
          0.775
Slin_2730
RagB/SusD domain-containing protein (447 aa)
              0.531
Slin_2729
TonB-dependent receptor plug (999 aa)
              0.498
Slin_2732
Hypothetical protein (449 aa)
              0.471
Slin_4662
Hypothetical protein (409 aa)
   
          0.465
Slin_2733
Hypothetical protein (570 aa)
              0.461
Slin_4739
UDP-N-acetylmuramyl tripeptide synthetase (498 aa)
         
  0.457
Slin_1108
D-alanine--D-alanine ligase; Cell wall formation (551 aa)
         
  0.457
Slin_3259
Crp/Fnr family transcriptional regulator (194 aa)
   
          0.457
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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