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Slin_2733 protein (Spirosoma linguale) - STRING interaction network
"Slin_2733" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2733Hypothetical protein (570 aa)    
Predicted Functional Partners:
Slin_2732
Hypothetical protein (449 aa)
 
       
0.875
Slin_2730
RagB/SusD domain-containing protein (447 aa)
 
          0.844
Slin_2729
TonB-dependent receptor plug (999 aa)
 
          0.831
Slin_4564
Hypothetical protein (171 aa)
   
          0.770
Slin_2735
Oxidoreductase molybdopterin binding protein (415 aa)
 
          0.727
Slin_2734
Cytochrome C class I (200 aa)
 
          0.717
Slin_0846
Metallophosphoesterase (371 aa)
   
          0.701
Slin_4809
phytanoyl-CoA dioxygenase (273 aa)
   
          0.691
Slin_5875
Hypothetical protein (134 aa)
   
          0.672
Slin_6057
Mechanosensitive ion channel MscS (779 aa)
   
          0.667
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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