STRINGSTRING
Slin_2743 protein (Spirosoma linguale) - STRING interaction network
"Slin_2743" - Phage shock protein C in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2743Phage shock protein C (847 aa)    
Predicted Functional Partners:
Slin_2744
PadR family transcriptional regulator (135 aa)
 
          0.910
Slin_2018
Hypothetical protein (686 aa)
   
          0.766
Slin_5161
Hypothetical protein (428 aa)
   
          0.756
Slin_3080
Hypothetical protein (1564 aa)
   
          0.743
Slin_5683
Hypothetical protein (330 aa)
   
          0.742
Slin_5122
Hypothetical protein (1005 aa)
   
          0.742
Slin_0566
Hypothetical protein (1086 aa)
   
          0.739
Slin_5235
Hypothetical protein (425 aa)
   
          0.732
Slin_0263
Hypothetical protein (905 aa)
   
          0.727
Slin_5597
Hypothetical protein (311 aa)
   
          0.724
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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