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Slin_2749 protein (Spirosoma linguale) - STRING interaction network
"Slin_2749" - NmrA family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2749NmrA family protein (298 aa)    
Predicted Functional Partners:
Slin_2748
Alpha/beta hydrolase fold protein (311 aa)
 
          0.805
Slin_6631
Fatty acid desaturase (361 aa)
   
          0.668
Slin_5991
Peptidase S8/S53 subtilisin kexin sedolisin (1343 aa)
   
          0.641
Slin_2345
Oxidoreductase molybdopterin binding protein (170 aa)
   
          0.634
Slin_3008
Hypothetical protein (419 aa)
   
          0.606
Slin_2747
Crp/Fnr family transcriptional regulator (187 aa)
              0.558
Slin_2732
Hypothetical protein (449 aa)
   
          0.558
Slin_4982
Fatty acid desaturase (343 aa)
   
          0.535
Slin_2750
Metal dependent phosphohydrolase (196 aa)
              0.531
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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