STRINGSTRING
Slin_2778 protein (Spirosoma linguale) - STRING interaction network
"Slin_2778" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2778Beta-lactamase (380 aa)    
Predicted Functional Partners:
Slin_2777
Hypothetical protein (246 aa)
              0.859
Slin_2776
Signal transduction histidine kinase LytS (343 aa)
              0.859
Slin_2779
Hypothetical protein (200 aa)
              0.829
Slin_1867
Beta-lactamase (517 aa)
   
     
  0.779
Slin_5392
beta-N-acetylhexosaminidase (953 aa)
 
     
  0.645
Slin_4196
Glycoside hydrolase (1002 aa)
 
     
  0.634
Slin_2775
LytTR family transcriptional regulator (258 aa)
              0.629
murQ
RpiR family transcriptional regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate (270 aa)
 
     
  0.518
Slin_0459
Hypothetical protein (390 aa)
          0.500
Slin_0923
Hypothetical protein (418 aa)
          0.485
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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