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Slin_2821 protein (Spirosoma linguale) - STRING interaction network
"Slin_2821" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2821Hypothetical protein (201 aa)    
Predicted Functional Partners:
Slin_2822
Glycosyl transferase family protein (357 aa)
 
          0.928
Slin_5636
TonB-dependent receptor (793 aa)
   
          0.680
gatB
glutamyl-tRNA(Gln) amidotransferase subunit beta; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (493 aa)
     
      0.594
Slin_4282
Hypothetical protein (432 aa)
   
          0.561
Slin_5189
N-acetylglucosamine kinase-like protein (281 aa)
   
          0.551
Slin_2823
AraC family transcriptional regulator (285 aa)
              0.496
Slin_6012
Hypothetical protein (297 aa)
   
          0.494
Slin_2820
TetR family transcriptional regulator (211 aa)
              0.493
Slin_0660
Hypothetical protein (223 aa)
   
          0.489
Slin_0213
Polysaccharide deacetylase (218 aa)
 
          0.450
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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