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Slin_2828 protein (Spirosoma linguale) - STRING interaction network
"Slin_2828" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2828Hypothetical protein (364 aa)    
Predicted Functional Partners:
Slin_2829
TonB-dependent receptor plug (803 aa)
 
          0.873
Slin_2536
Hypothetical protein (741 aa)
   
          0.761
Slin_5493
Hypothetical protein (432 aa)
   
          0.750
Slin_2351
Hypothetical protein (495 aa)
   
          0.744
Slin_1227
TonB-dependent receptor plug (923 aa)
   
          0.743
Slin_2827
Glycosyl transferase family protein (332 aa)
 
          0.723
Slin_2872
TonB-dependent receptor (934 aa)
   
          0.720
Slin_1582
TonB-dependent receptor plug (853 aa)
   
          0.704
Slin_0332
TonB-dependent receptor (869 aa)
   
          0.704
Slin_0014
Amidohydrolase 2 (374 aa)
   
          0.664
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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