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Slin_2830 protein (Spirosoma linguale) - STRING interaction network
"Slin_2830" - PHP domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2830PHP domain-containing protein (577 aa)    
Predicted Functional Partners:
Slin_3277
Beta-lactamase (253 aa)
     
      0.980
Slin_1050
Beta-lactamase (255 aa)
     
      0.980
hisB
Histidinol-phosphatase (382 aa)
   
  0.977
Slin_4880
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)
     
  0.975
Slin_0543
DNA polymerase I (1024 aa)
     
  0.972
Slin_0521
Exodeoxyribonuclease III Xth (254 aa)
   
  0.954
Slin_5528
HAD-superfamily hydrolase (172 aa)
     
  0.938
Slin_3107
Histidinol-phosphate phosphatase (199 aa)
     
  0.938
Slin_5075
Beta-lactamase (464 aa)
   
 
  0.841
Slin_2716
Beta-lactamase (481 aa)
   
 
  0.841
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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