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Slin_2850 protein (Spirosoma linguale) - STRING interaction network
"Slin_2850" - DNA polymerase beta domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2850DNA polymerase beta domain-containing protein (111 aa)    
Predicted Functional Partners:
Slin_2849
HEPN domain-containing protein (129 aa)
 
          0.967
Slin_2848
Hypothetical protein (128 aa)
              0.859
Slin_2847
Hypothetical protein (62 aa)
              0.759
Slin_2851
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (811 aa)
              0.647
Slin_2846
HAD-superfamily hydrolase (226 aa)
              0.643
Slin_2845
Phenazine biosynthesis protein PhzF family (273 aa)
              0.534
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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