STRINGSTRING
Slin_2857 protein (Spirosoma linguale) - STRING interaction network
"Slin_2857" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2857Hypothetical protein (312 aa)    
Predicted Functional Partners:
Slin_2858
Hypothetical protein (162 aa)
            0.880
Slin_4695
Hypothetical protein (699 aa)
   
          0.732
Slin_4151
Hypothetical protein (182 aa)
   
          0.682
Slin_3405
Hypothetical protein (565 aa)
   
          0.612
Slin_2825
Hypothetical protein (322 aa)
   
          0.554
Slin_2424
Beta-lactamase (322 aa)
   
          0.542
Slin_2334
Ethyl tert-butyl ether degradation EthD (100 aa)
   
          0.494
Slin_2854
Proteasome-type protease (245 aa)
   
          0.448
Slin_2369
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein (748 aa)
   
          0.445
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]