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Slin_2860 protein (Spirosoma linguale) - STRING interaction network
"Slin_2860" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2860Hypothetical protein (168 aa)    
Predicted Functional Partners:
Slin_0742
LmbE family protein (882 aa)
 
          0.732
Slin_4181
Hypothetical protein (1750 aa)
   
          0.683
Slin_3484
Group 1 glycosyl transferase (379 aa)
   
          0.649
Slin_2914
TonB-dependent receptor plug (800 aa)
   
          0.611
Slin_5213
TonB-dependent receptor plug (831 aa)
   
          0.605
bshC
Hypothetical protein (515 aa)
   
          0.591
Slin_0030
TonB-dependent receptor plug (786 aa)
   
          0.586
Slin_5340
TonB-dependent receptor plug (814 aa)
   
          0.581
Slin_2829
TonB-dependent receptor plug (803 aa)
   
          0.570
Slin_5545
Hypothetical protein (165 aa)
   
          0.567
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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