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Slin_2875 protein (Spirosoma linguale) - STRING interaction network
"Slin_2875" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2875Hypothetical protein (843 aa)    
Predicted Functional Partners:
Slin_4064
Hypothetical protein (180 aa)
   
          0.753
Slin_1382
Smr protein/MutS2 (340 aa)
   
          0.749
Slin_4518
Hypothetical protein (451 aa)
   
          0.746
Slin_1298
Hypothetical protein (434 aa)
   
          0.717
Slin_4939
Hypothetical protein (360 aa)
   
          0.714
Slin_0962
TonB-dependent receptor plug (1060 aa)
   
          0.713
Slin_3922
Hypothetical protein; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (126 aa)
   
          0.699
Slin_0243
Hypothetical protein (287 aa)
   
          0.692
Slin_0992
Surface antigen (D15) (875 aa)
   
          0.687
Slin_5436
Hypothetical protein (505 aa)
   
          0.681
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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