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Slin_2877 protein (Spirosoma linguale) - STRING interaction network
"Slin_2877" - Beta-phosphoglucomutase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2877Beta-phosphoglucomutase (219 aa)    
Predicted Functional Partners:
Slin_1747
Glycoside hydrolase family protein (778 aa)
 
  0.998
Slin_2878
Hypothetical protein (243 aa)
              0.712
Slin_2879
Hypothetical protein (149 aa)
              0.642
Slin_2883
Alpha amylase (630 aa)
 
   
  0.609
Slin_0347
Alpha amylase (522 aa)
 
   
  0.522
Slin_4250
Methionine synthase (1261 aa)
              0.515
pgk
Phosphoglycerate kinase (395 aa)
   
      0.514
Slin_2434
Class V aminotransferase (338 aa)
   
   
  0.503
Slin_1073
Class V aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (363 aa)
   
   
  0.503
Slin_3625
Alpha amylase (571 aa)
 
   
  0.484
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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