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Slin_2880 protein (Spirosoma linguale) - STRING interaction network
"Slin_2880" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2880Hypothetical protein (537 aa)    
Predicted Functional Partners:
Slin_2329
Glycoside hydrolase family protein (343 aa)
 
          0.773
Slin_1470
Hypothetical protein (419 aa)
   
          0.683
Slin_1418
Hypothetical protein (284 aa)
   
          0.608
Slin_2879
Hypothetical protein (149 aa)
              0.590
Slin_1718
Hypothetical protein (903 aa)
   
          0.574
Slin_6081
Glycoside hydrolase family protein (480 aa)
   
     
  0.571
Slin_2881
Crp/Fnr family transcriptional regulator (187 aa)
              0.563
Slin_1419
Glycoside hydrolase (648 aa)
 
          0.555
Slin_4788
Xylan 1,4-beta-xylosidase (562 aa)
   
     
  0.550
Slin_6431
Glycoside hydrolase family protein (325 aa)
 
          0.535
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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