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Slin_2883 protein (Spirosoma linguale) - STRING interaction network
"Slin_2883" - Alpha amylase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2883Alpha amylase (630 aa)    
Predicted Functional Partners:
Slin_5282
Malto-oligosyltrehalose synthase (1411 aa)
   
 
  0.971
Slin_3551
Alpha-glucan phosphorylase (567 aa)
   
  0.967
Slin_5124
4-alpha-glucanotransferase (525 aa)
 
 
  0.948
Slin_6226
Amino acid permease-associated protein (490 aa)
   
  0.947
Slin_5443
Amino acid permease-associated protein (463 aa)
   
  0.947
Slin_5170
Amino acid permease-associated protein (502 aa)
   
  0.947
Slin_5065
Amino acid permease-associated protein (457 aa)
   
  0.947
Slin_4174
Amino acid permease-associated protein (478 aa)
   
  0.947
Slin_4173
Amino acid permease-associated protein (429 aa)
   
  0.947
Slin_3470
Amino acid permease-associated protein (561 aa)
   
  0.947
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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