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Slin_2884 protein (Spirosoma linguale) - STRING interaction network
"Slin_2884" - Alpha amylase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2884Alpha amylase (565 aa)    
Predicted Functional Partners:
Slin_5282
Malto-oligosyltrehalose synthase (1411 aa)
       
    0.903
Slin_3112
Malto-oligosyltrehalose synthase (935 aa)
       
    0.903
Slin_5124
4-alpha-glucanotransferase (525 aa)
       
    0.900
Slin_3551
Alpha-glucan phosphorylase (567 aa)
         
    0.900
Slin_2883
Alpha amylase (630 aa)
 
          0.884
Slin_2885
Hypothetical protein (289 aa)
              0.657
Slin_2423
Double-stranded RNA/RNA-DNA hybrid binding protein-like protein (212 aa)
   
          0.630
Slin_2886
Hypothetical protein (326 aa)
              0.551
Slin_5454
Hypothetical protein (792 aa)
   
          0.535
Slin_1089
Major facilitator superfamily protein (509 aa)
 
          0.528
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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