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Slin_2886 protein (Spirosoma linguale) - STRING interaction network
"Slin_2886" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2886Hypothetical protein (326 aa)    
Predicted Functional Partners:
Slin_2885
Hypothetical protein (289 aa)
              0.712
Slin_2887
Hypothetical protein (48 aa)
              0.625
Slin_3039
Hypothetical protein (534 aa)
   
          0.604
Slin_2145
Alpha/beta hydrolase fold protein (477 aa)
   
          0.574
Slin_2884
Alpha amylase (565 aa)
              0.551
Slin_1082
Chaperonin Cpn10 (124 aa)
   
          0.530
Slin_0012
Acetyltransferase (195 aa)
   
          0.528
Slin_2373
Hypothetical protein (619 aa)
   
          0.512
Slin_3040
TonB-dependent receptor plug (1107 aa)
   
          0.493
Slin_0499
Hypothetical protein (445 aa)
   
          0.480
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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