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Slin_2901 protein (Spirosoma linguale) - STRING interaction network
"Slin_2901" - AsnC family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2901AsnC family transcriptional regulator (154 aa)    
Predicted Functional Partners:
Slin_2902
Alanine dehydrogenase (376 aa)
              0.711
Slin_0858
Radical SAM protein (349 aa)
 
 
  0.685
Slin_4391
Radical SAM protein (327 aa)
   
 
  0.642
Slin_0240
Radical SAM protein (340 aa)
   
 
  0.642
Slin_2319
Glutamate synthase (1524 aa)
   
   
  0.459
Slin_5405
uroporphyrin-III C-methyltransferase (252 aa)
   
   
  0.434
Slin_2052
uroporphyrin-III C-methyltransferase (266 aa)
   
   
  0.434
Slin_2903
Globin (161 aa)
              0.424
Slin_6544
Class I and II aminotransferase (403 aa)
         
  0.413
Slin_4804
Class I and II aminotransferase (413 aa)
         
  0.413
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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