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Slin_2902 protein (Spirosoma linguale) - STRING interaction network
"Slin_2902" - Alanine dehydrogenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2902Alanine dehydrogenase (376 aa)    
Predicted Functional Partners:
Slin_1914
Class I and II aminotransferase (403 aa)
         
  0.828
Slin_2994
Alanine dehydrogenase/PNT domain-containing protein (403 aa)
   
   
 
0.828
Slin_2901
AsnC family transcriptional regulator (154 aa)
              0.711
Slin_2266
Alanine racemase (835 aa)
         
  0.626
Slin_2903
Globin (161 aa)
              0.601
Slin_2319
Glutamate synthase (1524 aa)
           
  0.451
Slin_2911
Malate dehydrogenase (755 aa)
         
  0.441
Slin_5888
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (423 aa)
         
  0.417
Slin_6494
3-hydroxyacyl-ACP dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (464 aa)
              0.404
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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