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Slin_2912 protein (Spirosoma linguale) - STRING interaction network
"Slin_2912" - tryptophanyl-tRNA synthetase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2912tryptophanyl-tRNA synthetase (325 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase subunit beta (814 aa)
   
   
  0.842
Slin_5630
seryl-tRNA synthetase (423 aa)
   
 
  0.792
Slin_2913
LuxR family transcriptional regulator (105 aa)
              0.752
Slin_2911
Malate dehydrogenase (755 aa)
   
   
  0.739
leuS
leucyl-tRNA synthetase (949 aa)
 
   
  0.724
pheS
phenylalanyl-tRNA synthetase subunit alpha (346 aa)
   
   
  0.719
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (682 aa)
   
   
  0.707
argS
arginyl-tRNA synthetase (599 aa)
   
   
  0.696
thrS
threonyl-tRNA synthetase (647 aa)
   
   
  0.685
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (433 aa)
 
   
  0.650
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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