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Slin_2913 protein (Spirosoma linguale) - STRING interaction network
"Slin_2913" - LuxR family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2913LuxR family transcriptional regulator (105 aa)    
Predicted Functional Partners:
Slin_2912
tryptophanyl-tRNA synthetase (325 aa)
              0.752
Slin_6208
Histidine kinase (657 aa)
 
 
  0.716
Slin_3917
PAS/PAC sensor signal transduction histidine kinase (683 aa)
   
 
  0.628
Slin_0386
PAS/PAC sensor signal transduction histidine kinase (674 aa)
   
 
  0.628
Slin_2508
PAS/PAC sensor hybrid histidine kinase (784 aa)
   
 
  0.598
Slin_1362
Hypothetical protein (396 aa)
   
          0.539
Slin_1989
CheR-type MCP methyltransferase with PAS/PAC sensor (1110 aa)
     
 
  0.534
Slin_1184
ArsR family transcriptional regulator (99 aa)
     
 
  0.530
Slin_6490
ATP-binding protein (636 aa)
 
 
  0.522
Slin_6439
Histidine kinase (657 aa)
   
 
  0.521
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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