STRINGSTRING
Slin_2921 protein (Spirosoma linguale) - STRING interaction network
"Slin_2921" - LmbE family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2921LmbE family protein (264 aa)    
Predicted Functional Partners:
Slin_2920
Type 12 methyltransferase (195 aa)
        0.997
Slin_2922
acyl-CoA dehydrogenase type 2 domain-containing protein (391 aa)
 
        0.972
Slin_2919
Family 2 glycosyl transferase (384 aa)
 
   
  0.791
Slin_3484
Group 1 glycosyl transferase (379 aa)
 
 
  0.600
Slin_2923
Ribose-phosphate pyrophosphokinase (313 aa)
              0.580
Slin_6507
Group 1 glycosyl transferase (356 aa)
   
 
  0.534
Slin_6405
Group 1 glycosyl transferase (384 aa)
   
 
  0.534
Slin_6293
Group 1 glycosyl transferase (423 aa)
   
 
  0.534
Slin_5697
Glycogen(starch) synthase (606 aa)
   
 
  0.534
Slin_4368
Group 1 glycosyl transferase (420 aa)
   
 
  0.534
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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