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Slin_2926 protein (Spirosoma linguale) - STRING interaction network
"Slin_2926" - Heavy metal transport/detoxification protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2926Heavy metal transport/detoxification protein (71 aa)    
Predicted Functional Partners:
Slin_2925
ATPase P (767 aa)
 
          0.917
Slin_5832
Hypothetical protein (102 aa)
   
          0.735
Slin_1842
Xylose isomerase (287 aa)
   
          0.724
Slin_1176
Hypothetical protein (120 aa)
   
          0.713
Slin_5231
Hypothetical protein (343 aa)
   
          0.657
Slin_2765
RagB/SusD domain-containing protein (542 aa)
   
          0.653
Slin_0813
Hypothetical protein (240 aa)
   
          0.630
Slin_0657
Hypothetical protein (222 aa)
   
          0.595
Slin_0221
Hypothetical protein (484 aa)
   
          0.591
Slin_6454
Hypothetical protein (231 aa)
   
          0.578
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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