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Slin_2953 protein (Spirosoma linguale) - STRING interaction network
"Slin_2953" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2953Family 2 glycosyl transferase (244 aa)    
Predicted Functional Partners:
Slin_2954
Hypothetical protein (476 aa)
              0.856
Slin_2955
Hypothetical protein (315 aa)
 
   
  0.761
Slin_0292
CheR-type MCP methyltransferase (253 aa)
 
            0.635
Slin_2952
Family 2 glycosyl transferase (305 aa)
 
          0.603
Slin_5209
Family 2 glycosyl transferase (243 aa)
   
          0.587
Slin_6090
Hypothetical protein (398 aa)
   
 
  0.571
Slin_2546
Family 2 glycosyl transferase (253 aa)
   
          0.549
Slin_6420
Family 2 glycosyl transferase (333 aa)
   
          0.522
Slin_3526
Nucleotide sugar dehydrogenase (443 aa)
   
   
  0.516
Slin_6307
Capsular exopolysaccharide family protein (772 aa)
   
   
  0.511
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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