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Slin_2956 protein (Spirosoma linguale) - STRING interaction network
"Slin_2956" - YjgP/YjgQ family permease in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2956YjgP/YjgQ family permease (358 aa)    
Predicted Functional Partners:
Slin_1196
ABC transporter (243 aa)
 
  0.995
Slin_1984
YjgP/YjgQ family permease (501 aa)
 
   
    0.967
Slin_6513
ABC transporter (613 aa)
 
 
  0.870
Slin_4434
Outer membrane protein assembly complex, YaeT protein (865 aa)
 
        0.828
Slin_6494
3-hydroxyacyl-ACP dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (464 aa)
 
        0.789
Slin_6331
ABC transporter (593 aa)
 
 
  0.783
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (342 aa)
 
      0.779
Slin_3449
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (377 aa)
 
      0.769
Slin_1469
ABC transporter (586 aa)
 
 
  0.760
Slin_1528
Hypothetical protein (984 aa)
   
          0.737
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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