STRINGSTRING
Slin_2957 protein (Spirosoma linguale) - STRING interaction network
"Slin_2957" - DtxR family iron in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2957DtxR family iron (metal) dependent repressor (218 aa)    
Predicted Functional Partners:
mntH
NRAMP family Mn2+/Fe2+ transporter; H(+)-stimulated, divalent metal cation uptake system (448 aa)
       
  0.881
Slin_2956
YjgP/YjgQ family permease (358 aa)
              0.608
Slin_1451
Ferrous iron transporter B; Fe(2+) uptake system, probably driven by GTP (705 aa)
         
  0.464
Slin_2955
Hypothetical protein (315 aa)
              0.441
Slin_0733
Natural resistance-associated macrophage protein (422 aa)
       
  0.432
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]