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Slin_2969 protein (Spirosoma linguale) - STRING interaction network
"Slin_2969" - Peptidase C14 caspase catalytic subunit p20 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2969Peptidase C14 caspase catalytic subunit p20 (261 aa)    
Predicted Functional Partners:
Slin_2970
Protein serine/threonine phosphatase (273 aa)
       
    0.948
Slin_2968
Serine/threonine protein kinase (741 aa)
     
    0.910
Slin_2972
Hypothetical protein (325 aa)
              0.864
Slin_2971
Hypothetical protein (200 aa)
              0.859
Slin_2967
Hypothetical protein (302 aa)
              0.725
Slin_2322
Serine/threonine protein kinase (349 aa)
       
    0.667
Slin_1282
Serine/threonine protein kinase (517 aa)
       
    0.667
Slin_1281
Serine/threonine protein kinase (429 aa)
       
    0.667
Slin_1283
Protein serine/threonine phosphatase (482 aa)
       
    0.650
Slin_0458
Ankyrin (161 aa)
       
    0.644
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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