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Slin_3009 protein (Spirosoma linguale) - STRING interaction network
"Slin_3009" - Glycerophosphoryl diester phosphodiesterase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3009Glycerophosphoryl diester phosphodiesterase (289 aa)    
Predicted Functional Partners:
Slin_3008
Hypothetical protein (419 aa)
              0.815
Slin_3010
Hypothetical protein (1129 aa)
              0.638
Slin_5304
Glycerophosphoryl diester phosphodiesterase (422 aa)
   
          0.618
Slin_6051
FAD dependent oxidoreductase (552 aa)
   
 
  0.556
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate (500 aa)
   
   
  0.546
Slin_0701
Peroxidase (211 aa)
   
 
  0.451
Slin_0646
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (184 aa)
   
 
  0.451
Slin_2251
Major facilitator superfamily protein (439 aa)
   
        0.403
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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