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Slin_3018 protein (Spirosoma linguale) - STRING interaction network
"Slin_3018" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3018Hypothetical protein (123 aa)    
Predicted Functional Partners:
Slin_3583
Hypothetical protein (313 aa)
   
          0.762
Slin_5852
Hypothetical protein (623 aa)
   
          0.727
Slin_4404
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (159 aa)
 
            0.719
Slin_3585
Hypothetical protein (324 aa)
   
          0.719
Slin_5875
Hypothetical protein (134 aa)
   
          0.717
Slin_2239
Hypothetical protein (333 aa)
   
          0.693
Slin_5680
Hypothetical protein (125 aa)
   
          0.643
Slin_3235
Hypothetical protein (154 aa)
   
          0.613
Slin_3022
Hypothetical protein (174 aa)
   
          0.612
Slin_5518
Chromosome segregation ATPase (1100 aa)
   
          0.593
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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