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Slin_3019 protein (Spirosoma linguale) - STRING interaction network
"Slin_3019" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3019Hypothetical protein (197 aa)    
Predicted Functional Partners:
Slin_1643
Rhodopsin (250 aa)
   
          0.712
Slin_5639
Alpha/beta hydrolase fold protein (269 aa)
   
          0.688
Slin_4317
Hypothetical protein (620 aa)
   
          0.633
Slin_3185
Monooxygenase FAD-binding protein (375 aa)
   
          0.630
Slin_0022
RagB/SusD domain-containing protein (562 aa)
   
          0.628
Slin_0364
Hypothetical protein (683 aa)
   
          0.608
Slin_1167
TonB-dependent receptor plug (1071 aa)
   
          0.596
Slin_4988
Colicin V production protein (181 aa)
   
          0.576
Slin_5097
Hypothetical protein (727 aa)
   
          0.562
Slin_0021
TonB-dependent receptor (976 aa)
   
          0.545
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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