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Slin_3022 protein (Spirosoma linguale) - STRING interaction network
"Slin_3022" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3022Hypothetical protein (174 aa)    
Predicted Functional Partners:
Slin_3583
Hypothetical protein (313 aa)
   
          0.767
Slin_6454
Hypothetical protein (231 aa)
 
          0.758
Slin_5874
Hypothetical protein (245 aa)
   
          0.758
Slin_3020
Histidine kinase (1282 aa)
 
          0.755
Slin_2039
Hypothetical protein (558 aa)
   
          0.754
Slin_3585
Hypothetical protein (324 aa)
   
          0.753
Slin_3485
UbiA prenyltransferase (291 aa)
   
          0.753
Slin_1871
Hypothetical protein (794 aa)
   
          0.751
Slin_5231
Hypothetical protein (343 aa)
   
          0.750
Slin_4905
Gliding-associated ABC transporter substrate-binding protein GldG (555 aa)
   
          0.744
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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