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Slin_3050 protein (Spirosoma linguale) - STRING interaction network
"Slin_3050" - ArsR family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3050ArsR family transcriptional regulator (106 aa)    
Predicted Functional Partners:
Slin_3049
Activator of Hsp90 ATPase 1 family protein (167 aa)
 
          0.941
Slin_2299
Hypothetical protein (220 aa)
 
          0.850
Slin_3048
Rifampin ADP-ribosyl transferase (150 aa)
              0.648
Slin_3051
Hypothetical protein (45 aa)
              0.628
Slin_6177
Beta-lactamase (470 aa)
   
 
  0.611
Slin_5172
Beta-lactamase (466 aa)
   
 
  0.611
Slin_6576
UBA/THIF-type NAD/FAD binding protein (348 aa)
   
 
  0.571
Slin_3463
UBA/THIF-type NAD/FAD binding protein (379 aa)
   
 
  0.571
Slin_1503
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (437 aa)
 
   
  0.543
Slin_4250
Methionine synthase (1261 aa)
         
  0.530
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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