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Slin_3082 protein (Spirosoma linguale) - STRING interaction network
"Slin_3082" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3082Hypothetical protein (382 aa)    
Predicted Functional Partners:
Slin_3081
alpha-N-arabinofuranosidase (347 aa)
 
          0.828
Slin_3725
Hypothetical protein (235 aa)
   
          0.741
Slin_6570
Oxidoreductase domain-containing protein (448 aa)
   
          0.537
Slin_4515
Hypothetical protein (166 aa)
   
          0.530
Slin_3080
Hypothetical protein (1564 aa)
              0.503
Slin_1843
Oxidoreductase domain-containing protein (447 aa)
   
          0.478
Slin_6191
Hypothetical protein (855 aa)
 
          0.465
Slin_0966
Hypothetical protein (259 aa)
   
          0.415
Slin_2353
Alpha-1,2-mannosidase (762 aa)
   
          0.408
Slin_3393
alpha-N-arabinofuranosidase (350 aa)
 
          0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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