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Slin_3089 protein (Spirosoma linguale) - STRING interaction network
"Slin_3089" - Restriction modification system DNA specificity domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3089Restriction modification system DNA specificity domain-containing protein (520 aa)    
Predicted Functional Partners:
Slin_3088
Adenine-specific DNA-methyltransferase (502 aa)
 
  0.994
Slin_3086
Type I site-specific deoxyribonuclease (813 aa)
 
 
 
  0.977
Slin_6258
N-6 DNA methylase (787 aa)
 
 
  0.918
Slin_3087
Hypothetical protein (329 aa)
              0.859
Slin_6264
Type III restriction protein res subunit (1016 aa)
 
   
  0.778
Slin_0543
DNA polymerase I (1024 aa)
     
 
  0.757
Slin_3090
HNH endonuclease (367 aa)
              0.748
Slin_3085
Hypothetical protein (55 aa)
              0.624
Slin_6260
Restriction modification system DNA specificity domain-containing protein (441 aa)
          0.585
Slin_1967
Integrase family protein (429 aa)
   
   
  0.530
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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