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Slin_3095 protein (Spirosoma linguale) - STRING interaction network
"Slin_3095" - P4 family phage/plasmid primase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3095P4 family phage/plasmid primase (486 aa)    
Predicted Functional Partners:
Slin_3096
Phage transcriptional regulator AlpA (100 aa)
              0.659
Slin_3860
O-antigen polymerase (494 aa)
   
          0.648
Slin_3858
Lipopolysaccharide biosynthesis protein (735 aa)
   
          0.621
Slin_3952
Hypothetical protein (327 aa)
   
          0.614
Slin_3094
Hypothetical protein (404 aa)
 
          0.600
Slin_3283
Hypothetical protein (121 aa)
 
          0.559
Slin_6613
Hypothetical protein (433 aa)
   
          0.555
Slin_3097
Hypothetical protein (238 aa)
              0.535
Slin_2260
Hypothetical protein (319 aa)
   
          0.532
Slin_1264
Xylose isomerase (274 aa)
   
          0.510
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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