STRINGSTRING
Slin_3104 protein (Spirosoma linguale) - STRING interaction network
"Slin_3104" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3104Response regulator receiver protein (272 aa)    
Predicted Functional Partners:
Slin_3105
Group 1 glycosyl transferase (328 aa)
              0.574
Slin_2373
Hypothetical protein (619 aa)
   
          0.538
Slin_1225
Hypothetical protein (801 aa)
   
          0.506
Slin_5266
Response regulator receiver protein (175 aa)
   
          0.488
Slin_4149
Response regulator receiver protein (146 aa)
   
          0.459
Slin_2170
Response regulator receiver protein (148 aa)
   
          0.454
Slin_5066
TonB-dependent receptor plug (1001 aa)
   
          0.436
Slin_2452
Hypothetical protein (649 aa)
   
          0.433
Slin_3443
Hypothetical protein (952 aa)
   
          0.431
Slin_1582
TonB-dependent receptor plug (853 aa)
   
          0.425
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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