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Slin_3113 protein (Spirosoma linguale) - STRING interaction network
"Slin_3113" - Malto-oligosyltrehalose trehalohydrolase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3113Malto-oligosyltrehalose trehalohydrolase (640 aa)    
Predicted Functional Partners:
Slin_3112
Malto-oligosyltrehalose synthase (935 aa)
 
 
  0.997
Slin_5282
Malto-oligosyltrehalose synthase (1411 aa)
 
 
  0.995
Slin_3114
Alpha amylase (579 aa)
 
 
0.984
Slin_4791
Trehalose synthase (1114 aa)
 
 
0.974
Slin_4792
Trehalose-phosphatase (738 aa)
   
  0.970
Slin_6507
Group 1 glycosyl transferase (356 aa)
     
 
  0.962
Slin_6405
Group 1 glycosyl transferase (384 aa)
     
 
  0.962
Slin_6293
Group 1 glycosyl transferase (423 aa)
     
 
  0.962
Slin_5697
Glycogen(starch) synthase (606 aa)
     
 
  0.962
Slin_4368
Group 1 glycosyl transferase (420 aa)
     
 
  0.962
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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