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Slin_3115 protein (Spirosoma linguale) - STRING interaction network
"Slin_3115" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3115Hypothetical protein (229 aa)    
Predicted Functional Partners:
Slin_3116
Hypothetical protein (229 aa)
 
       
0.874
Slin_4212
Hypothetical protein (188 aa)
   
          0.778
Slin_3114
Alpha amylase (579 aa)
   
        0.590
Slin_3112
Malto-oligosyltrehalose synthase (935 aa)
   
        0.481
Slin_3113
Malto-oligosyltrehalose trehalohydrolase (640 aa)
   
        0.479
Slin_1106
Endonuclease/exonuclease/phosphatase (358 aa)
   
          0.436
Slin_1513
Hypothetical protein (118 aa)
   
          0.431
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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