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Slin_3122 protein (Spirosoma linguale) - STRING interaction network
"Slin_3122" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3122Hypothetical protein (437 aa)    
Predicted Functional Partners:
Slin_3121
TonB-dependent siderophore receptor (809 aa)
              0.745
Slin_4998
Cytochrome C class I (756 aa)
   
          0.703
Slin_3396
Phosphoesterase (928 aa)
   
          0.683
Slin_4662
Hypothetical protein (409 aa)
   
          0.680
Slin_5108
Hypothetical protein (387 aa)
   
          0.675
Slin_2454
TonB-dependent receptor plug (1024 aa)
   
          0.667
Slin_4086
FAD linked oxidase (539 aa)
   
          0.663
Slin_3419
RagB/SusD domain-containing protein (521 aa)
   
          0.646
Slin_3421
RagB/SusD domain-containing protein (521 aa)
   
          0.635
Slin_4207
RagB/SusD domain-containing protein (451 aa)
   
          0.616
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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