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Slin_3136 protein (Spirosoma linguale) - STRING interaction network
"Slin_3136" - TrmH family RNA methyltransferase in Spirosoma linguale
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
Slin_3136TrmH family RNA methyltransferase (276 aa)    
Predicted Functional Partners:
Slin_3137
Hypothetical protein (483 aa)
              0.871
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (825 aa)
 
    0.808
Slin_1590
Serine O-acetyltransferase (281 aa)
   
        0.756
Slin_4091
Satase isoform II (178 aa)
   
        0.708
pheT
phenylalanyl-tRNA synthetase subunit beta (814 aa)
 
   
  0.679
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (83 aa)
 
      0.651
Slin_1453
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (501 aa)
   
 
  0.643
Slin_3013
uroporphyrin-III C/tetrapyrrole methyltransferase (233 aa)
 
   
  0.618
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (246 aa)
 
   
  0.599
Slin_3138
Type 11 methyltransferase (255 aa)
              0.583
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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