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Slin_3140 protein (Spirosoma linguale) - STRING interaction network
"Slin_3140" - Ohr subfamily peroxiredoxin in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3140Ohr subfamily peroxiredoxin (147 aa)    
Predicted Functional Partners:
Slin_3141
MarR family transcriptional regulator (146 aa)
 
     
  0.969
Slin_3139
Alcohol dehydrogenase zinc-binding domain-containing protein (332 aa)
   
        0.893
Slin_4792
Trehalose-phosphatase (738 aa)
     
   
  0.704
Slin_3142
Multi-sensor hybrid histidine kinase (939 aa)
   
   
  0.528
Slin_5629
Ferritin Dps family protein (168 aa)
   
   
  0.468
Slin_4325
Ferritin Dps family protein (157 aa)
   
   
  0.468
Slin_0734
Ferritin Dps family protein (157 aa)
   
   
  0.468
Slin_1713
Luciferase family oxidoreductase, group 1 (338 aa)
 
     
  0.466
Slin_3143
Fis family transcriptional regulator (454 aa)
              0.456
Slin_0302
Peptidoglycan-binding lysin domain-containing protein (155 aa)
     
        0.416
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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