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Slin_3144 protein (Spirosoma linguale) - STRING interaction network
"Slin_3144" - Glycosyl transferase family protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3144Glycosyl transferase family protein (366 aa)    
Predicted Functional Partners:
Slin_4071
UDP-N-acetylglucosamine 2-epimerase (368 aa)
   
  0.819
Slin_3145
Hypothetical protein (402 aa)
 
          0.782
Slin_4067
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase-like protein (331 aa)
   
          0.758
Slin_4152
Cyanophycin synthetase (895 aa)
   
   
  0.724
Slin_2266
Alanine racemase (835 aa)
   
 
  0.707
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (449 aa)
 
   
  0.700
Slin_1357
Competence/damage-inducible protein CinA (417 aa)
 
     
  0.697
Slin_4751
Cell cycle protein (373 aa)
 
 
  0.692
Slin_0717
WecB/TagA/CpsF family glycosyl transferase (276 aa)
 
 
 
  0.651
Slin_3146
Group 1 glycosyl transferase (382 aa)
 
          0.638
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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