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Slin_3158 protein (Spirosoma linguale) - STRING interaction network
"Slin_3158" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3158Hypothetical protein (857 aa)    
Predicted Functional Partners:
Slin_1382
Smr protein/MutS2 (340 aa)
   
          0.751
Slin_4939
Hypothetical protein (360 aa)
   
          0.724
Slin_4518
Hypothetical protein (451 aa)
   
          0.723
Slin_4064
Hypothetical protein (180 aa)
   
          0.718
Slin_0243
Hypothetical protein (287 aa)
   
          0.718
Slin_5334
Excisionase family DNA binding domain-containing protein (124 aa)
   
          0.704
Slin_0962
TonB-dependent receptor plug (1060 aa)
   
          0.701
Slin_3099
Integrase family protein (441 aa)
   
          0.673
Slin_3022
Hypothetical protein (174 aa)
   
          0.668
Slin_1298
Hypothetical protein (434 aa)
   
          0.668
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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