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Slin_3164 protein (Spirosoma linguale) - STRING interaction network
"Slin_3164" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3164Hypothetical protein (534 aa)    
Predicted Functional Partners:
Slin_6195
Hypothetical protein (478 aa)
   
          0.698
Slin_1716
Hypothetical protein (514 aa)
   
          0.698
Slin_4634
Hypothetical protein (288 aa)
   
          0.686
Slin_2597
UTP--glucose-1-phosphate uridylyltransferase (1119 aa)
   
          0.656
Slin_6546
Hypothetical protein (421 aa)
   
          0.605
Slin_3163
Nucleotidyltransferase (356 aa)
              0.582
Slin_6432
RagB/SusD domain-containing protein (542 aa)
   
          0.544
Slin_3165
Hypothetical protein (51 aa)
              0.531
Slin_3934
Glycoside hydrolase family protein (576 aa)
   
          0.499
Slin_1416
Glycoside hydrolase family protein (557 aa)
   
          0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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