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Slin_3223 protein (Spirosoma linguale) - STRING interaction network
"Slin_3223" - Gliding motility-associated protein GldM in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3223Gliding motility-associated protein GldM (528 aa)    
Predicted Functional Partners:
Slin_3224
Gliding motility-associated protein GldL (272 aa)
 
     
  0.936
Slin_3225
Hypothetical protein (377 aa)
 
     
  0.906
Slin_3226
Hypothetical protein (324 aa)
 
          0.885
Slin_4895
Gliding motility-associated lipoprotein GldD (195 aa)
   
     
  0.799
Slin_5539
Hypothetical protein (329 aa)
   
     
  0.799
Slin_5515
Gliding motility-associated lipoprotein GldJ (420 aa)
   
     
  0.797
Slin_3219
Hypothetical protein (749 aa)
   
     
  0.791
Slin_6621
Hypothetical protein (2541 aa)
   
     
  0.787
Slin_3080
Hypothetical protein (1564 aa)
   
          0.778
Slin_2039
Hypothetical protein (558 aa)
   
          0.778
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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