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Slin_3251 protein (Spirosoma linguale) - STRING interaction network
"Slin_3251" - Peptidase S10 serine carboxypeptidase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3251Peptidase S10 serine carboxypeptidase (514 aa)    
Predicted Functional Partners:
Slin_2629
Glycosyl hydrolase (397 aa)
       
    0.858
Slin_2631
Beta-galactosidase (701 aa)
     
    0.843
Slin_4490
Hypothetical protein (843 aa)
   
          0.709
Slin_3250
Peptidase M20 (424 aa)
   
      0.679
Slin_4538
Hypothetical protein (225 aa)
       
      0.595
Slin_1833
Hypothetical protein (476 aa)
       
      0.595
Slin_5309
Amidohydrolase (543 aa)
 
          0.585
Slin_2535
Peptidase M14 carboxypeptidase A (860 aa)
   
          0.549
Slin_2851
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (811 aa)
   
   
  0.539
Slin_0262
Xaa-Pro aminopeptidase (468 aa)
   
          0.537
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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