STRINGSTRING
Slin_3260 protein (Spirosoma linguale) - STRING interaction network
"Slin_3260" - Purine nucleoside permease in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3260Purine nucleoside permease (356 aa)    
Predicted Functional Partners:
Slin_5607
Hypothetical protein (164 aa)
            0.653
Slin_3262
Inosine/uridine-preferring nucleoside hydrolase (309 aa)
        0.649
Slin_3261
Beta-lactamase (249 aa)
              0.578
Slin_6128
L-amino-acid oxidase (524 aa)
   
          0.567
Slin_2358
Hypothetical protein (172 aa)
   
          0.481
Slin_5287
TonB-dependent receptor (933 aa)
   
          0.461
Slin_3259
Crp/Fnr family transcriptional regulator (194 aa)
              0.450
Slin_2934
TonB-dependent receptor (987 aa)
   
          0.427
Slin_3346
Peptidase M20 (453 aa)
   
          0.413
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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