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Slin_3263 protein (Spirosoma linguale) - STRING interaction network
"Slin_3263" - AraC family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3263AraC family transcriptional regulator (326 aa)    
Predicted Functional Partners:
Slin_3264
Bifunctional deaminase-reductase domain-containing protein (199 aa)
 
          0.621
Slin_3265
Hypothetical protein (127 aa)
 
          0.607
Slin_5642
AraC family transcriptional regulator (308 aa)
   
          0.604
lysS
lysyl-tRNA synthetase (583 aa)
       
      0.567
Slin_3777
AraC family transcriptional regulator (294 aa)
   
          0.544
Slin_0526
Hypothetical protein (354 aa)
   
          0.523
Slin_2332
AraC family transcriptional regulator (311 aa)
   
          0.510
Slin_5371
AraC family transcriptional regulator (326 aa)
   
          0.490
Slin_2752
AraC family transcriptional regulator (294 aa)
   
          0.488
Slin_0508
AraC family transcriptional regulator (295 aa)
   
          0.468
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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