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Slin_3272 protein (Spirosoma linguale) - STRING interaction network
"Slin_3272" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3272Hypothetical protein (402 aa)    
Predicted Functional Partners:
Slin_3273
Hypothetical protein (345 aa)
          0.996
Slin_1752
Hypothetical protein (152 aa)
   
          0.591
Slin_3274
Beta-lactamase (524 aa)
              0.544
Slin_3275
N-acetyltransferase GCN5 (171 aa)
              0.543
Slin_1758
Saccharopine dehydrogenase (407 aa)
   
          0.483
Slin_3271
Hypothetical protein (151 aa)
              0.464
Slin_0400
Hypothetical protein (162 aa)
   
          0.453
Slin_6457
Hypothetical protein (143 aa)
   
          0.437
Slin_4874
Hypothetical protein (1215 aa)
   
          0.437
Slin_2828
Hypothetical protein (364 aa)
   
          0.412
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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