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Slin_3276 protein (Spirosoma linguale) - STRING interaction network
"Slin_3276" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3276Response regulator receiver protein (126 aa)    
Predicted Functional Partners:
Slin_5610
Histidine kinase (344 aa)
 
          0.793
Slin_1270
PAS/PAC sensor signal transduction histidine kinase (405 aa)
 
          0.792
Slin_3829
PAS/PAC sensor signal transduction histidine kinase (475 aa)
 
          0.787
Slin_0595
PAS/PAC sensor signal transduction histidine kinase (752 aa)
 
          0.767
Slin_3394
PAS/PAC sensor signal transduction histidine kinase (728 aa)
 
          0.766
Slin_1893
PAS/PAC sensor signal transduction histidine kinase (644 aa)
 
          0.765
Slin_2761
PAS/PAC sensor signal transduction histidine kinase (679 aa)
 
          0.764
Slin_6422
Histidine kinase (432 aa)
   
          0.758
Slin_1659
PAS/PAC sensor signal transduction histidine kinase (1043 aa)
   
          0.757
Slin_6126
Histidine kinase (628 aa)
   
          0.756
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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